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%% SCRAP: papers/ONTOLOGY_README
%% SOURCE: docs/working/papers/ONTOLOGY_README.md
%% STATUS: SUPERSEDED
%% FITS: ssrn/ch-ontology
%% EDITORIAL: lifted — stub only; content fully superseded by ONTOLOGY.tex
\section*{Note on Ontology Documentation}
This stub records the provenance of the ontology documentation set.
The content has been consolidated into the preceding ontology section
(\S\ref{sec:ontology}), which is the authoritative reference.
The source repository provides the following companion artifacts alongside
\texttt{ONTOLOGY.md}:
\begin{description}
\item[\texttt{ontology\_diagrams.dot}] Six GraphViz diagrams: main ontology
concept map, five-layer component taxonomy, feedback-loop interaction
graph, phase-space attractor basin, thermodynamic metaphor mapping, and
execution-event data-flow. Generate PDF for inclusion in LaTeX with
\texttt{dot -Tpdf ontology\_diagrams.dot -o ontology\_full.pdf}.
\item[\texttt{FINAL\_REPORT/appendix\_glossary.adoc}] AsciiDoc glossary
with full mathematical notation, Levene's test application notes, and
cross-references. Converted to LaTeX in \S\ref{app:glossary}.
\end{description}
Preferred terminology for academic writing is summarized in the deprecated-
terms table in \S\ref{sec:ontology}. When in doubt, the golden rule is:
describe the literal implementation; label the thermodynamic analogy
explicitly as a conceptual metaphor.